BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D10SP1|AL428381
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig207 837 0.0
3x_Contig651 635 0.0
>3x_Contig207
Length = 944
Score = 837 bits (419), Expect = 0.0
Identities = 431/437 (98%), Gaps = 1/437 (0%)
Strand = Plus / Plus
Query: 442 atggggcattcytgaattaaacaaggttagagtatatagtaactacaggctaggagagct 501
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atggggcattcttgaattaaacaaggttagagtatatagtaactacaggctaggagagct 61
Query: 502 tttcttttgcyttattattttyytcaagttcagtctatacacagcagaaagggaatggaa 561
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttcttttgctttattatttttttcaagttcagtctatacacagcagaaagggaatggaa 121
Query: 562 agtgaccaagagattagttttcttttgttttcattattgtytcgatagttcgacgtagtt 621
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 122 agtgaccaagagattagttttcttttgttttcattattgtttcgatagttcgacgtagtt 181
Query: 622 cccagggaatacaccttggacgccattgtagacaccgacccaccatcctgctgcatcgga 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cccagggaatacaccttggacgccattgtagacaccgacccaccatcctgctgcatcgga 241
Query: 682 acgatccacgacttggattatggcaccagcagggaacgtcaaatcaccttcggcttgggc 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgatccacgacttggattatggcaccagcagggaacgtcaaatcaccttcggcttgggc 301
Query: 742 cgtgtaatcgtataaagcggtacatgtctccactcctgcactagtgggaggagtgtatga 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgtgtaatcgtataaagcggtacatgtctccactcctgcactagtgggaggagtgtatga 361
Query: 802 tgcctgggtcgcagtggtgggca-cgaattgtatcctgcgataccagcggcacctgcaac 860
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgcctgggtcgcagtggtgggcaccgaattgtatcctgcgataccagcggcacctgcaac 421
Query: 861 acctccgattggatact 877
|||||||||||||||||
Sbjct: 422 acctccgattggatact 438
>3x_Contig651
Length = 1486
Score = 635 bits (318), Expect = 0.0
Identities = 334/340 (98%), Gaps = 1/340 (0%)
Strand = Plus / Plus
Query: 1 atcgagagggcttcttgaawtagacgtgcaaggaggaagtgggatagtgatatccaaagt 60
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 atcgagagggcttctagaaagagacgtgcaaggaggaagtgggatagtgatatccaaagt 1207
Query: 61 attttgaagggagggggctttcaggctctggttgtgtgcactgcagtgggtagcagttgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1208 attttgaagggagggggctttcaggctctggttgtgtgcactgcagtggg-agcagttgt 1266
Query: 121 gatggtgggagcyaattgttgcattgaaatacatagctggttttaagtatatatagagac 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 gatggtgggagctaattgttgcattgaaatacatagctggttttaagtatatatagagac 1326
Query: 181 gtatctctttctgttcctgcagtaaggcttagtgtactttctcatggaattcttttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 gtatctctttctgttcctgcagtaaggcttagtgtactttctcatggaattcttttccat 1386
Query: 241 cttacctgctgtgtgcttggaaaccagtgtgattttagtggctggctctgcyactggtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1387 cttacctgctgtgtgcttggaaaccagtgtgattttagtggctggctctgctactggtga 1446
Query: 301 tgtgtagaaatataggggcatgtagacaggggttctgacg 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 tgtgtagaaatataggggcatgtagacaggggttctgacg 1486
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4276
Number of Sequences: 1807
Number of extensions: 4276
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 2
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)